==>runtrx start: date: Mon Jul 15 05:25:34 EDT 2024 ( mccune011.pppl.gov ) argv = 2 iarg = 2 cmd_opt = pre runtrx: tok.yy = D3D.17 ==========(runtrx)====================== date: Mon Jul 15 05:25:34 EDT 2024 ( mccune011.pppl.gov ) args: 169541P01 pre ==========(runtrx)====================== ==========(runtrx)====================== ==========TRANSP preprocessing========== date: Mon Jul 15 05:25:34 EDT 2024 ( mccune011.pppl.gov ) ==========check for 169541P01_mdsmark.sh=== ==========(runtrx)====================== ==========TRDAT execution=============== date: Mon Jul 15 05:25:34 EDT 2024 ( mccune011.pppl.gov ) TRDAT TRANSP Version: 24.0.1 TRANSP DOI: 10.11578/dc.20180627.4 Build Date: 2023/10/21 %trmpi_init.f90: LOG_LEVEL env. var.: 1 %trmpi_init.f90: logfile_level: warn (mpi_share_env) process myid= 0 cwd: /local/tr_mpodesta/transp_compute/D3D/169541P01 CTOKNM : Cdir = /local/tr_mpodesta/transp_compute/D3D/169541P01/ % DIRECTORY IS /local/tr_mpodesta/transp_compute/D3D/169541P01/; TOKAMAK ID SET TO D3D %trmpi_openlog: LOGFILE_LEVEL = warn %splitn_module: update block detected, t= 4.20000000000000 namelist element value field(s): decimal point(s) inserted: FOCLRA FOCLZA DTMINT DTMING PDELTA %NLIST: open namelist file169541P01TR.ZDA %trcom_static_box: loading static data %mds_setup: setting MDSplus server to: TRANSPGRID.PPPL.GOV %mds_setup: server set OK. %mds_setup: MDSplus opening tree: TRANSP_D3D 1695411601 %mds_setup: MDSplus tree open status: 265389633 -----------> entering UF0GET. %UF0DRD: DIMENSIONALITY OF INPUT FILE = 2 % NO. OF BEAMS (NB2 DATA) = 14 %UF0DRD: DIMENSIONALITY OF INPUT FILE = 3 UF0GET: -> Btor is clockwise from BTOR_CCW scalar in MMX data. UF0GET: -> Itor is counter-clockwise from ITOR_CCW scalar in MMX data. UF0GET: MMX max exponent: 2 %UF0GET -- finished. %DATCHK: full equilibrium input DATCHK: CHECKING ARRAY DIMENSIONS, SWITCHES, ETC %DATCHK: NYXINV incremented to be odd: 101 161 %DATCHK: no Lower Hybrid, NLLH=F %DATCKA: ACfile times pre-screen... %DATCKA -- CHECKING NON-DEFAULT SPECIFICATIONS FOR AC FILE I/O GIVEN IN NAMELIST CHARACTER DATA ARRAYS "SELOUT" AND "SELAVG" %ASCXFIN -- AC FILE OPERATION COMPLETED SUCCESSFULLY. dummy trdatusub vsn trgdat_check called (OK). dummy trdatusub vsn trgdat_psload called (OK). *UTRCHK: CHECKING TRDAT NAMELIST SPECIFICATIONS. %UTRCHK: full equilibrium input *DDEFIN: SET UP PHYSICS DATA FOR ANALYSIS: TIME RANGE IS TINIT= 4.1000E+00, FTIME= 4.3000E+00 SECONDS. SETSCD - SET SCALAR DATA FOR UPF SETTIM - SET UP TIMING INFORMATION FOR UPF *UF1GET: PROCESSING "CUR": plasma current amps ------------------- *UF1GET: PROCESSING "RBZ": [ext. B field] * R Tesla*cm ----------- %FIXUNS: CONVERTING UFILE RBZ DATA UNITS, M.T , TO Tesla*cm >CONVERSION FACTOR: * 100.000 *UF1GET: PROCESSING "BDI": beta diamagnetic -------------------- *UF1GET: PROCESSING "DFL": diamagnetic flux Webers --------------- %SETDFLT: "GAS" INPUT DATA FILE NOT SPECIFIED ==>DEFAULT VALUE SUBSTITUTED, GASFLN = 0.0000E+00 *UF1GET: PROCESSING "L2B": li/2 + beta(pol) -------------------- *UF1GET: PROCESSING "NTX": Neutron flux n/sec -------------------- *UF1GET: PROCESSING "PF0": Psi(axis) Wb/rad ---------------------- %CHKTIM: DATA TIME RANGE 4.2050E+00 TO 4.6450E+00 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). *UF1GET: PROCESSING "PLF": Poloidal flux Wb/rad ------------------ %CHKTIM: DATA TIME RANGE 4.2050E+00 TO 4.6450E+00 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). *UF1GET: PROCESSING "TPI": particle confinement seconds ---------- *UF1GET: PROCESSING "TRF": Toroidal flux Webers ------------------ %CHKTIM: DATA TIME RANGE 4.2050E+00 TO 4.6450E+00 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). *UF1GET: PROCESSING "VSF": surface voltage volts ----------------- *UF3GET: PROCESSING "MMX": Equilibrium moments cm ---------------- %FIXUNS: CONVERTING UFILE DATA UNITS, M , TO cm >CONVERSION FACTOR: * 100.000 %CHKTIM: DATA TIME RANGE 4.2050E+00 TO 4.6450E+00 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %Geteq: MMX file does not cover time range of run; equilibrium geometry will be extrapolated flat to fill the time range ---> Geteq: #moments NMOM = 16 Geteq: Interpolate equilibrium data for UPF SETLIM - SET UP Axisymmetric limiter data for UPF *UF1GET: PROCESSING "LIM": Axisymmetric Limiter cm --------------- %UF1GET: X axis is not the timebase, processing axis units cm %FIXUNS: CONVERTING UFILE LIM TIMEBASE UNITS, M , TO cm >CONVERSION FACTOR: * 100.000 %FIXUNS: CONVERTING UFILE LIM DATA UNITS, M , TO cm >CONVERSION FACTOR: * 100.000 *UF2GET: PROCESSING "BOL": Power radiated W/cm**3 ---------------- %UF2GET -- INPUT UFILE AXES OUT OF ORDER, WILL SWAP: 1ST DIMENSION = " "; 2ND DIMENSION = "seconds " %SETDAT2-- X axis is normalized flux, not modified, npts=101 *UF2GET: PROCESSING "GRB": MHD g (R*Bt) profile Tesla*cm --------- %UF2GET -- INPUT UFILE AXES OUT OF ORDER, WILL SWAP: 1ST DIMENSION = " "; 2ND DIMENSION = "seconds " %FIXUNS: CONVERTING UFILE GRB DATA UNITS, TESLA*M , TO Tesla*cm >CONVERSION FACTOR: * 100.000 %CHKTIM: DATA TIME RANGE 4.2050E+00 TO 4.6450E+00 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %SETDAT2-- X axis is normalized flux, not modified, npts= 41 *UF2GET: PROCESSING "NER": electron density n/cm**3 -------------- %UF2GET -- INPUT UFILE AXES OUT OF ORDER, WILL SWAP: 1ST DIMENSION = " "; 2ND DIMENSION = "seconds " %FIXUNS: CONVERTING UFILE NER DATA UNITS, M**-3 , TO n/cm**3 >CONVERSION FACTOR: *0.100000E-05 %SETDAT2-- X axis is normalized flux, not modified, npts=101 *UF2GET: PROCESSING "NIM": impurity density n/cm**3 -------------- %UF2GET -- INPUT UFILE AXES OUT OF ORDER, WILL SWAP: 1ST DIMENSION = " "; 2ND DIMENSION = "seconds " %FIXUNS: CONVERTING UFILE NIM DATA UNITS, M**-3 , TO n/cm**3 >CONVERSION FACTOR: *0.100000E-05 %SETDAT2-- X axis is normalized flux, not modified, npts=101 *UF2GET: PROCESSING "OMG": plasma rotation rad/sec --------------- %UF2GET -- INPUT UFILE AXES OUT OF ORDER, WILL SWAP: 1ST DIMENSION = " "; 2ND DIMENSION = "seconds " %SETDAT2-- X axis is normalized flux, not modified, npts=101 *UF2GET: PROCESSING "PRS": MHD Pressure profile Pascals ---------- %UF2GET -- INPUT UFILE AXES OUT OF ORDER, WILL SWAP: 1ST DIMENSION = " "; 2ND DIMENSION = "seconds " %CHKTIM: DATA TIME RANGE 4.2050E+00 TO 4.6450E+00 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %SETDAT2-- X axis is normalized flux, not modified, npts= 41 *UF2GET: PROCESSING "QPR": q profile --------------------------- %UF2GET -- INPUT UFILE AXES OUT OF ORDER, WILL SWAP: 1ST DIMENSION = " "; 2ND DIMENSION = "seconds " %CHKTIM: DATA TIME RANGE 4.2050E+00 TO 4.6450E+00 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %SETDAT2-- X axis is normalized flux, not modified, npts= 41 *UF2GET: PROCESSING "TER": electron temperature eV --------------- %UF2GET -- INPUT UFILE AXES OUT OF ORDER, WILL SWAP: 1ST DIMENSION = " "; 2ND DIMENSION = "seconds " %FIXUNS: CONVERTING UFILE TER DATA UNITS, KEV , TO eV >CONVERSION FACTOR: * 1000.00 %SETDAT2-- X axis is normalized flux, not modified, npts=101 *UF2GET: PROCESSING "TI2": ion temperature eV -------------------- %UF2GET -- INPUT UFILE AXES OUT OF ORDER, WILL SWAP: 1ST DIMENSION = " "; 2ND DIMENSION = "seconds " %FIXUNS: CONVERTING UFILE TI2 DATA UNITS, KEV , TO eV >CONVERSION FACTOR: * 1000.00 %SETDAT2-- X axis is normalized flux, not modified, npts=101 *UF2GET: PROCESSING "ZF2": Zeff profile ------------------------ %UF2GET -- INPUT UFILE AXES OUT OF ORDER, WILL SWAP: 1ST DIMENSION = " "; 2ND DIMENSION = "seconds " %SETDAT2-- X axis is normalized flux, not modified, npts=101 *DDEFIN: Set Plasma Heating parameters :- ========================== -> entering setnbi (neutral beam powers, voltages, etc.) SETNBI - SET UP NEUTRAL BEAM DATA FOR UPF *UF2GET: PROCESSING "NB2": beam heating data ------------------- %SETNBI- BEAM FULL ENERGY FRACTIONS SET BY NBI FILE ** %SETNBI- BEAM HALF ENERGY FRACTIONS SET BY NBI FILE ** %setnbi: NBI on/off times taken from data. %NB_ONOFF: NBI on/off times (s): 3.8050E+00 4.8850E+00 -> entering setecp (ECH/ECCD powers) SETECP - SET UP ECRH POWER DATA FOR UPF *UF2GET: PROCESSING "ECP": ECRF antenna powers watts ------------- %ECH/ECCD on/off times taken from data. %EC_ONOFF: ECH on/off times (s): 4.0051E+00 4.8649E+00 SETECP - read polar/poloidal angles vs. time *UF2GET: PROCESSING "ECA": ECRF poloidal aim degrees ------------- SETECP - read azimuthal/toroidal angles vs. time *UF2GET: PROCESSING "ECB": ECRF toroidal aim degrees ------------- Zeff vs. (x,t) only: Zeff vs. (x,t) input data provided. %SETDFLT: "DTG" INPUT DATA FILE NOT SPECIFIED ==>DEFAULT VALUE SUBSTITUTED, DTMAXG = 1.0000E-02 %setmisc -- time dependent geometry timestep enabled (ZOOM is off). %SETDFLT: "DTS" INPUT DATA FILE NOT SPECIFIED ==>DEFAULT VALUE SUBSTITUTED, DT_SOURCES = 1.0000E-03 %setmisc -- time dependent source timestep enabled (ZOOM is off). %SETDFLT: "DTX" INPUT DATA FILE NOT SPECIFIED ==>DEFAULT VALUE SUBSTITUTED, DT_OUTPUT = 1.0000E-02 %setmisc -- time dependent output timestep enabled (ZOOM is off). -------------------------------------------------- %trdat_bdy_check -- checking plasma boundary data trdat_bdy_check: OK ...min(r_curvature/(Rmax-Rmin)) is: 4.226655423865696E-002 ...at time t= 4.23000000000000 seconds. ------------> thermal ion ptcl balance summary: Hydrogen (absent) Deuterium NDEFINE=0 NMODEL=4 RC=Tau(p) GF=ZERO Tritium (absent) Helium-3 (absent) Helium-4 (absent) Lithium-6 (absent) Recycling fractions RFRAC are specified. ------------------------------------ Fast ion summary: Beam species: D Fusion product species: (None) Minority RF species: (None) ------------------------------------ In TRDAT: calling copy_toraynml copy_toraynml: template fetch via "mds_get_inf" subprocess... COPY_TORAYNML: $UFILES_ROOT/bin/mds_get_inf s TRANSPGRID.PPPL.GOV t TRANSP_D3 D r 169541P01 l .NML:TORAY q ************************************************************************ Program: mds_get_inf Version: v0.3.2 Revision: 953b182 Date: 10/05/2023 ************************************************************************ mds_get_inf retrievs a text node from a TRANSP run and writes it into a file . or uses TRANSP conventions: name_list -> TR.DAT contents -> TF.PLN mds_shot = 1695411601 mds_conopn: option = 3 1695411601 TRANSP_D3D ...connecting to server: TRANSPGRID.PPPL.GOV mds_shot = 1695411601 .NML:TORAY does not exist 1 COPY_TORAYNML: failed to extract .NML:TORAY (now look for template file). COPY_TORAYNML: namelist: TORAY_TEMPLATE= " /p/nstxusr/nstx-users/mpodesta/transp/diiid/169541P01/169541P01_input_toray.nml " COPY_TORAYNML: Toray template file= /p/nstxusr/nstx-users/mpodesta/transp/diiid/169541P01/169541P01_input_toray .nml COPY_TORAYNML: zcmd= cp /p/nstxusr/nstx-users/mpodesta/transp/diiid/169541P01/169541P01_input_toray. nml ./169541P01_toray.in COPY_TORAYNML: file copy status (0 is normal): 0 In TRDAT: calling copy_gafitnml COPY_GAFITNML: namelist: GAFIT_TEMPLATE= "" COPY_GAFITNML: GAFIT_TEMPLATE is blank; Default used COPY_GAFITNML: Gafit template file= $CODESYSDIR/tables/rf_nml/gafit.in COPY_GAFITNML: zcmd= cp $CODESYSDIR/tables/rf_nml/gafit.in ./169541P01_gafit.in COPY_GAFITNML: file copy status (0 is normal): 0 In TRDAT: calling COPY_PTNML COPY_PTNML_SUB: namelist: pt_template= " /p/nstxusr/nstx-users/mpodesta/transp/diiid/169541P01/pt.nml" COPY_PTNML_SUB: PT_SOLVER namelist file= /p/nstxusr/nstx-users/mpodesta/transp/diiid/169541P01/pt.nml COPY_PTNML_SUB: zcmd= cp /p/nstxusr/nstx-users/mpodesta/transp/diiid/169541P01/pt.nml ./169541P01_pt. nml COPY_PTNML_SUB: file copy status (0 is normal): 0 In TRDAT: calling COPY_MMMNML COPY_MMM_SUB: namelist: mmm_template= " /p/nstxusr/nstx-users/mpodesta/transp/diiid/169541P01/169541P01_mmm.nml" COPY_MMM_SUB: MMM namelist file= /p/nstxusr/nstx-users/mpodesta/transp/diiid/169541P01/169541P01_mmm.nml COPY_MMM_SUB: zcmd= cp /p/nstxusr/nstx-users/mpodesta/transp/diiid/169541P01/169541P01_mmm.nml ./16 9541P01_mmm.nml COPY_MMM_SUB: file copy status (0 is normal): 0 ==========(runtrx TRDAT sts = 0)====== ==>runtrx: trdat execution successful will write to mdsplus later ==========LABEL execution=============== date: Mon Jul 15 05:25:39 EDT 2024 ( mccune011.pppl.gov ) ==>runtrx: label execution successful ==========add TF.PLN to MDSplus ======== ==========(runtrx)====================== date: Mon Jul 15 05:25:40 EDT 2024 ( mccune011.pppl.gov ) ************************************************************************ Program: mds_start Version: v0.3.2 Revision: 953b182 Date: 10/05/2023 ************************************************************************ mds_conopn: option = 4 1695411601 TRANSP_D3D ...connecting to server: TRANSPGRID.PPPL.GOV ...tcl("EDIT TRANSP_D3D/SHOT=1695411601") nid = 209 open 169541P01TF.PLN add_file: 8149 lines - 76 tcl("WRITE") stat = 1 ==========add PH.CDF to MDSplus ======== ==========(runtrx)====================== date: Mon Jul 15 05:25:40 EDT 2024 ( mccune011.pppl.gov ) ==>runtrx: LINK_ON_HOST environment variable detected. ==========(runtrx)====================== ==========>runtrx normal exit<========== date: Mon Jul 15 05:25:40 EDT 2024 ( mccune011.pppl.gov )