==>runtrx start: date: Tue Nov 19 20:10:23 EST 2024 ( mccune010.pppl.gov ) argv = 2 iarg = 2 cmd_opt = pre runtrx: tok.yy = EAST.22 ==========(runtrx)====================== date: Tue Nov 19 20:10:23 EST 2024 ( mccune010.pppl.gov ) args: 122555W41 pre ==========(runtrx)====================== ==========(runtrx)====================== ==========TRANSP preprocessing========== date: Tue Nov 19 20:10:23 EST 2024 ( mccune010.pppl.gov ) ==========check for 122555W41_mdsmark.sh=== ==========(runtrx)====================== ==========TRDAT execution=============== date: Tue Nov 19 20:10:23 EST 2024 ( mccune010.pppl.gov ) TRDAT TRANSP Version: 24.0.1 TRANSP DOI: 10.11578/dc.20180627.4 Build Date: 2023/10/21 %trmpi_init.f90: LOG_LEVEL env. var.: 1 %trmpi_init.f90: logfile_level: warn (mpi_share_env) process myid= 0 cwd: /local/tr_wchoi/transp_compute/EAST/122555W41 CTOKNM : Cdir = /local/tr_wchoi/transp_compute/EAST/122555W41/ % DIRECTORY IS /local/tr_wchoi/transp_compute/EAST/122555W41/; TOKAMAK ID SET TO EAST %trmpi_openlog: LOGFILE_LEVEL = warn namelist elements assigned more than once WITH change of value: TIEDGE namelist element value field(s): decimal point(s) inserted: TEPED TIPED YGEOANT_A %NLIST: open namelist file122555W41TR.ZDA CAUTION: trngen_uts.f90:icount_nsfast: NBEAM > 0, but, NLBEAM=.FALSE. ********* resetting NBEAM = 0 now. %trcom_static_box: loading static data %mds_setup: setting MDSplus server to: ATLAS.GAT.COM %mds_setup: server set OK. %mds_setup: MDSplus opening tree: TRANSP 1225552341 %mds_setup: MDSplus tree open status: 265389633 -----------> entering UF0GET. %UF0DRD: DIMENSIONALITY OF INPUT FILE = 3 UF0GET: -> Btor is clockwise from BTOR_CCW scalar in MMX data. UF0GET: -> Itor is counter-clockwise from ITOR_CCW scalar in MMX data. UF0GET: MMX max exponent: 2 %UF0GET -- finished. %DATCHK: full equilibrium input DATCHK: CHECKING ARRAY DIMENSIONS, SWITCHES, ETC %DATCHK: NYXINV incremented to be odd: 101 161 TIDXSW defaulted: value of 0.05 assigned. %DATCKICH: TORIC-5 solver, with numerical MHD equilibrium geometry. %DATCKICH: RGEOANT_A is in use => ignore NGEOANT=1 NGEOANT reset to match number of non-zero RGEOANT values. *** NGEOANT reset to: 15 Warning! Result depends on setting RGEOANT_A! %DATCKA: ACfile times pre-screen... %DATCKA -- CHECKING NON-DEFAULT SPECIFICATIONS FOR AC FILE I/O GIVEN IN NAMELIST CHARACTER DATA ARRAYS "SELOUT" AND "SELAVG" %ASCXFIN -- AC FILE OPERATION COMPLETED SUCCESSFULLY. %DATCKB: EDBFAC TOO SMALL; SET TO =2.0 dummy trdatusub vsn trgdat_check called (OK). dummy trdatusub vsn trgdat_psload called (OK). *UTRCHK: CHECKING TRDAT NAMELIST SPECIFICATIONS. %UTRCHK: full equilibrium input %UTRCHK warning: NO TOROIDAL ROTATION DATA & NLVPHI=.TRUE. _UTRCHK- ROTATION DATA TRIGRAPHS: VPH VP2 OMG *DDEFIN: SET UP PHYSICS DATA FOR ANALYSIS: TIME RANGE IS TINIT= 2.9700E+01, FTIME= 3.0100E+01 SECONDS. SETSCD - SET SCALAR DATA FOR UPF SETTIM - SET UP TIMING INFORMATION FOR UPF *UF1GET: PROCESSING "CUR": plasma current amps ------------------- *UF1GET: PROCESSING "RBZ": [ext. B field] * R Tesla*cm ----------- %CHKTIM: DATA TIME RANGE 2.9700E+01 TO 3.0100E+01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %SETDFLT: "GAS" INPUT DATA FILE NOT SPECIFIED ==>DEFAULT VALUE SUBSTITUTED, GASFLN = 0.0000E+00 *UF1GET: PROCESSING "PF0": Psi(axis) Wb/rad ---------------------- %CHKTIM: DATA TIME RANGE 2.9700E+01 TO 3.0100E+01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). *UF1GET: PROCESSING "PLF": Poloidal flux Wb/rad ------------------ %CHKTIM: DATA TIME RANGE 2.9700E+01 TO 3.0100E+01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). *UF1GET: PROCESSING "TRF": Toroidal flux Webers ------------------ %CHKTIM: DATA TIME RANGE 2.9700E+01 TO 3.0100E+01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). *UF1GET: PROCESSING "VSF": surface voltage volts ----------------- *UF3GET: PROCESSING "MMX": Equilibrium moments cm ---------------- %CHKTIM: DATA TIME RANGE 2.9700E+01 TO 3.0100E+01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %Geteq: MMX file does not cover time range of run; equilibrium geometry will be extrapolated flat to fill the time range ---> Geteq: #moments NMOM = 16 Geteq: Interpolate equilibrium data for UPF SETLIM - SET UP Axisymmetric limiter data for UPF *UF1GET: PROCESSING "LIM": Axisymmetric Limiter cm --------------- %UF1GET: X axis is not the timebase, processing axis units cm *UF2GET: PROCESSING "GRB": MHD g (R*Bt) profile Tesla*cm --------- %CHKTIM: DATA TIME RANGE 2.9700E+01 TO 3.0100E+01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %SETDAT2-- X axis is normalized flux, not modified, npts= 41 *UF2GET: PROCESSING "NER": electron density n/cm**3 -------------- %CHKTIM: DATA TIME RANGE 2.9700E+01 TO 3.0100E+01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %SETDAT2-- X axis is normalized flux, not modified, npts=101 *UF2GET: PROCESSING "PRS": MHD Pressure profile Pascals ---------- %CHKTIM: DATA TIME RANGE 2.9700E+01 TO 3.0100E+01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %SETDAT2-- X axis is normalized flux, not modified, npts= 41 *UF2GET: PROCESSING "QPR": q profile --------------------------- %CHKTIM: DATA TIME RANGE 2.9700E+01 TO 3.0100E+01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %SETDAT2-- X axis is normalized flux, not modified, npts= 41 *UF2GET: PROCESSING "TER": electron temperature eV --------------- %CHKTIM: DATA TIME RANGE 2.9700E+01 TO 3.0100E+01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %SETDAT2-- X axis is normalized flux, not modified, npts= 51 *UF2GET: PROCESSING "TI2": ion temperature eV -------------------- %CHKTIM: DATA TIME RANGE 2.9700E+01 TO 3.0100E+01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %SETDAT2-- X axis is normalized flux, not modified, npts=100 *DDEFIN: Set Plasma Heating parameters :- ========================== -> entering setrfp (ICRF powers) ...setting ICRF powers from namelist ICRF powers not stored by trdat. %ICRF_ONOFF: ICRF on/off times (s): 6.0000E+00 1.0000E+02 ...setting ICRF frequencies from namelist not stored in trdat. -> entering setlhp (Lower Hybrid powers) ...setting Lower Hybrid powers from namelist Powers vs. time not stored in trdat. -> entering setecp (ECH/ECCD powers) ...setting ECH/ECCD powers from namelist. ECH/ECCD powers not stored in trdat. Zeff fixed in time and space: Zeff data only found in namelist. %SETDFLT: "DTG" INPUT DATA FILE NOT SPECIFIED ==>DEFAULT VALUE SUBSTITUTED, DTMAXG = 1.0000E-02 %setmisc -- time dependent geometry timestep enabled (ZOOM is off). %SETDFLT: "DTS" INPUT DATA FILE NOT SPECIFIED ==>DEFAULT VALUE SUBSTITUTED, DT_SOURCES = 6.5000E-02 %setmisc -- time dependent source timestep enabled (ZOOM is off). %SETDFLT: "DTX" INPUT DATA FILE NOT SPECIFIED ==>DEFAULT VALUE SUBSTITUTED, DT_OUTPUT = 1.0000E-02 %setmisc -- time dependent output timestep enabled (ZOOM is off). -------------------------------------------------- %trdat_bdy_check -- checking plasma boundary data and checking plasma boundary is inside vacuum vessel trdat_bdy_check: OK ...min(r_curvature/(Rmax-Rmin)) is: 5.537456125928290E-002 ...at time t= 30.1000000000000 seconds. ------------> thermal ion ptcl balance summary: Hydrogen (absent) Deuterium NDEFINE=0 NMODEL=1 RC=Tau(p) GF=ZERO Tritium (absent) Helium-3 (absent) Helium-4 (absent) Lithium-6 (absent) Recycling fractions RFRAC are specified. ------------------------------------ Fast ion summary: Beam species: (None) Fusion product species: (None) Minority RF species: H ------------------------------------ In TRDAT: calling copy_hcd_nml copy_gennml_sub: template fetch via "mds_get_inf" subprocess... COPY_GENNML_SUB: $UFILES_ROOT/bin/mds_get_inf s ATLAS.GAT.COM t TRANSP r 122555 W41 l .NML:GENRAY_ECH q ************************************************************************ Program: mds_get_inf Version: v0.3.2 Revision: 953b182 Date: 10/05/2023 ************************************************************************ mds_get_inf retrievs a text node from a TRANSP run and writes it into a file . or uses TRANSP conventions: name_list -> TR.DAT contents -> TF.PLN mds_conopn: option = 3 0 TRANSP ...connecting to server: ATLAS.GAT.COM %mds_conopn: no valid mds-pulse nubmer ?mds_get_inf failed COPY_GENNML_SUB: failed to extract .NML:GENRAY_ECH (now look for template file). COPY_GENNML_SUB: namelist: GENRAY_ECH_TEMPLATE= " /p/transpusers/wchoi/EAST/genray_ech.nml" COPY_GENNML_SUB: Genray template file= /p/transpusers/wchoi/EAST/genray_ech.nml COPY_GENNML_SUB: zcmd= cp /p/transpusers/wchoi/EAST/genray_ech.nml ./122555W41_genray_ech.in COPY_GENNML_SUB: file copy status (0 is normal): 0 copy_gennml_sub: template fetch via "mds_get_inf" subprocess... COPY_GENNML_SUB: $UFILES_ROOT/bin/mds_get_inf s ATLAS.GAT.COM t TRANSP r 122555 W41 l .NML:GENRAY_LHH q ************************************************************************ Program: mds_get_inf Version: v0.3.2 Revision: 953b182 Date: 10/05/2023 ************************************************************************ mds_get_inf retrievs a text node from a TRANSP run and writes it into a file . or uses TRANSP conventions: name_list -> TR.DAT contents -> TF.PLN mds_conopn: option = 3 0 TRANSP ...connecting to server: ATLAS.GAT.COM %mds_conopn: no valid mds-pulse nubmer ?mds_get_inf failed COPY_GENNML_SUB: failed to extract .NML:GENRAY_LHH (now look for template file). COPY_GENNML_SUB: namelist: GENRAY_LHH_TEMPLATE= " /p/transpusers/wchoi/EAST/85310/genray_input" COPY_GENNML_SUB: Genray template file= /p/transpusers/wchoi/EAST/85310/genray_input COPY_GENNML_SUB: zcmd= cp /p/transpusers/wchoi/EAST/85310/genray_input ./122555W41_genray_lhh.in COPY_GENNML_SUB: file copy status (0 is normal): 0 copy_cql3dnml_sub: template fetch via "mds_get_inf" subprocess... COPY_CQL3DNML_SUB$UFILES_ROOT/bin/mds_get_inf s ATLAS.GAT.COM t TRANSP r 122555 W41 l .NML:CQL3D_LHH q ************************************************************************ Program: mds_get_inf Version: v0.3.2 Revision: 953b182 Date: 10/05/2023 ************************************************************************ mds_get_inf retrievs a text node from a TRANSP run and writes it into a file . or uses TRANSP conventions: name_list -> TR.DAT contents -> TF.PLN mds_conopn: option = 3 0 TRANSP ...connecting to server: ATLAS.GAT.COM %mds_conopn: no valid mds-pulse nubmer ?mds_get_inf failed COPY_CQL3DNML_SUB failed to extract .NML:CQL3D_LHH (now look for template file). COPY_CQL3DNML_SUBnamelist: CQL3D_LHH_TEMPLATE= " /p/transpusers/wchoi/EAST/85310/cql3d_input" COPY_CQL3DNML_SUBCql3d template file= /p/transpusers/wchoi/EAST/85310/cql3d_input COPY_CQL3DNML_SUBzcmd= cp /p/transpusers/wchoi/EAST/85310/cql3d_input ./122555W41_cql3d_lhh.in COPY_CQL3DNML_SUB file copy status (0 is normal): 0 copy_cql3dnml_sub: template fetch via "mds_get_inf" subprocess... COPY_CQL3DNML_SUB$UFILES_ROOT/bin/mds_get_inf s ATLAS.GAT.COM t TRANSP r 122555 W41 l .NML:CQL3D_ECH q ************************************************************************ Program: mds_get_inf Version: v0.3.2 Revision: 953b182 Date: 10/05/2023 ************************************************************************ mds_get_inf retrievs a text node from a TRANSP run and writes it into a file . or uses TRANSP conventions: name_list -> TR.DAT contents -> TF.PLN mds_conopn: option = 3 0 TRANSP ...connecting to server: ATLAS.GAT.COM %mds_conopn: no valid mds-pulse nubmer ?mds_get_inf failed COPY_CQL3DNML_SUB failed to extract .NML:CQL3D_ECH (now look for template file). COPY_CQL3DNML_SUBnamelist: CQL3D_ECH_TEMPLATE= " /p/transpusers/wchoi/EAST/85310/cql3d_input" COPY_CQL3DNML_SUBCql3D template file= /p/transpusers/wchoi/EAST/85310/cql3d_input COPY_CQL3DNML_SUBzcmd= cp /p/transpusers/wchoi/EAST/85310/cql3d_input ./122555W41_cql3d_ech.in COPY_CQL3DNML_SUB file copy status (0 is normal): 0 In TRDAT: calling copy_hcd_nml copy_gennml_sub: template fetch via "mds_get_inf" subprocess... COPY_GENNML_SUB: $UFILES_ROOT/bin/mds_get_inf s ATLAS.GAT.COM t TRANSP r 122555 W41 l .NML:GENRAY_ECH q ************************************************************************ Program: mds_get_inf Version: v0.3.2 Revision: 953b182 Date: 10/05/2023 ************************************************************************ mds_get_inf retrievs a text node from a TRANSP run and writes it into a file . or uses TRANSP conventions: name_list -> TR.DAT contents -> TF.PLN mds_conopn: option = 3 0 TRANSP ...connecting to server: ATLAS.GAT.COM %mds_conopn: no valid mds-pulse nubmer ?mds_get_inf failed COPY_GENNML_SUB: failed to extract .NML:GENRAY_ECH (now look for template file). COPY_GENNML_SUB: namelist: GENRAY_ECH_TEMPLATE= " /p/transpusers/wchoi/EAST/genray_ech.nml" COPY_GENNML_SUB: Genray template file= /p/transpusers/wchoi/EAST/genray_ech.nml COPY_GENNML_SUB: zcmd= cp /p/transpusers/wchoi/EAST/genray_ech.nml ./122555W41_genray_ech.in COPY_GENNML_SUB: file copy status (0 is normal): 0 copy_gennml_sub: template fetch via "mds_get_inf" subprocess... COPY_GENNML_SUB: $UFILES_ROOT/bin/mds_get_inf s ATLAS.GAT.COM t TRANSP r 122555 W41 l .NML:GENRAY_LHH q ************************************************************************ Program: mds_get_inf Version: v0.3.2 Revision: 953b182 Date: 10/05/2023 ************************************************************************ mds_get_inf retrievs a text node from a TRANSP run and writes it into a file . or uses TRANSP conventions: name_list -> TR.DAT contents -> TF.PLN mds_conopn: option = 3 0 TRANSP ...connecting to server: ATLAS.GAT.COM %mds_conopn: no valid mds-pulse nubmer ?mds_get_inf failed COPY_GENNML_SUB: failed to extract .NML:GENRAY_LHH (now look for template file). COPY_GENNML_SUB: namelist: GENRAY_LHH_TEMPLATE= " /p/transpusers/wchoi/EAST/85310/genray_input" COPY_GENNML_SUB: Genray template file= /p/transpusers/wchoi/EAST/85310/genray_input COPY_GENNML_SUB: zcmd= cp /p/transpusers/wchoi/EAST/85310/genray_input ./122555W41_genray_lhh.in COPY_GENNML_SUB: file copy status (0 is normal): 0 copy_cql3dnml_sub: template fetch via "mds_get_inf" subprocess... COPY_CQL3DNML_SUB$UFILES_ROOT/bin/mds_get_inf s ATLAS.GAT.COM t TRANSP r 122555 W41 l .NML:CQL3D_LHH q ************************************************************************ Program: mds_get_inf Version: v0.3.2 Revision: 953b182 Date: 10/05/2023 ************************************************************************ mds_get_inf retrievs a text node from a TRANSP run and writes it into a file . or uses TRANSP conventions: name_list -> TR.DAT contents -> TF.PLN mds_conopn: option = 3 0 TRANSP ...connecting to server: ATLAS.GAT.COM %mds_conopn: no valid mds-pulse nubmer ?mds_get_inf failed COPY_CQL3DNML_SUB failed to extract .NML:CQL3D_LHH (now look for template file). COPY_CQL3DNML_SUBnamelist: CQL3D_LHH_TEMPLATE= " /p/transpusers/wchoi/EAST/85310/cql3d_input" COPY_CQL3DNML_SUBCql3d template file= /p/transpusers/wchoi/EAST/85310/cql3d_input COPY_CQL3DNML_SUBzcmd= cp /p/transpusers/wchoi/EAST/85310/cql3d_input ./122555W41_cql3d_lhh.in COPY_CQL3DNML_SUB file copy status (0 is normal): 0 copy_cql3dnml_sub: template fetch via "mds_get_inf" subprocess... COPY_CQL3DNML_SUB$UFILES_ROOT/bin/mds_get_inf s ATLAS.GAT.COM t TRANSP r 122555 W41 l .NML:CQL3D_ECH q ************************************************************************ Program: mds_get_inf Version: v0.3.2 Revision: 953b182 Date: 10/05/2023 ************************************************************************ mds_get_inf retrievs a text node from a TRANSP run and writes it into a file . or uses TRANSP conventions: name_list -> TR.DAT contents -> TF.PLN mds_conopn: option = 3 0 TRANSP ...connecting to server: ATLAS.GAT.COM %mds_conopn: no valid mds-pulse nubmer ?mds_get_inf failed COPY_CQL3DNML_SUB failed to extract .NML:CQL3D_ECH (now look for template file). COPY_CQL3DNML_SUBnamelist: CQL3D_ECH_TEMPLATE= " /p/transpusers/wchoi/EAST/85310/cql3d_input" COPY_CQL3DNML_SUBCql3D template file= /p/transpusers/wchoi/EAST/85310/cql3d_input COPY_CQL3DNML_SUBzcmd= cp /p/transpusers/wchoi/EAST/85310/cql3d_input ./122555W41_cql3d_ech.in COPY_CQL3DNML_SUB file copy status (0 is normal): 0 In TRDAT: calling COPY_PTNML COPY_PTNML_SUB: namelist: pt_template= " /p/transpusers/wchoi/EAST/ptransp_122555W25.nml" COPY_PTNML_SUB: PT_SOLVER namelist file= /p/transpusers/wchoi/EAST/ptransp_122555W25.nml COPY_PTNML_SUB: zcmd= cp /p/transpusers/wchoi/EAST/ptransp_122555W25.nml ./122555W41_pt.nml COPY_PTNML_SUB: file copy status (0 is normal): 0 In TRDAT: calling COPY_GLF23NML COPY_GLF23_SUB: namelist: glf23_template= " /p/transpusers/wchoi/EAST/glf23_default.nml" COPY_GLF23_SUB: GLF23 namelist file= /p/transpusers/wchoi/EAST/glf23_default.nml COPY_GLF23_SUB: zcmd= cp /p/transpusers/wchoi/EAST/glf23_default.nml ./122555W41_glf23.nml COPY_GLF23_SUB: file copy status (0 is normal): 0 ==========(runtrx TRDAT sts = 0)====== ==>runtrx: trdat execution successful will write to mdsplus later ==========LABEL execution=============== date: Tue Nov 19 20:10:46 EST 2024 ( mccune010.pppl.gov ) ==>runtrx: label execution successful ==========add TF.PLN to MDSplus ======== ==========(runtrx)====================== date: Tue Nov 19 20:10:46 EST 2024 ( mccune010.pppl.gov ) ************************************************************************ Program: mds_start Version: v0.3.2 Revision: 953b182 Date: 10/05/2023 ************************************************************************ mds_conopn: option = 4 1225552341 TRANSP ...connecting to server: ATLAS.GAT.COM ...tcl("EDIT TRANSP/SHOT=1225552341") nid = 9795 open 122555W41TF.PLN add_file: 4466 lines - 63 tcl("WRITE") stat = 1 ==========add PH.CDF to MDSplus ======== ==========(runtrx)====================== date: Tue Nov 19 20:10:47 EST 2024 ( mccune010.pppl.gov ) ==>runtrx: LINK_ON_HOST environment variable detected. ==========(runtrx)====================== ==========>runtrx normal exit<========== date: Tue Nov 19 20:10:47 EST 2024 ( mccune010.pppl.gov )