==>runtrx start: date: Thu Jun 27 06:49:21 EDT 2024 ( mccune022.pppl.gov ) argv = 2 iarg = 2 cmd_opt = run runtrx: tok.yy = MAST.14 ==========(runtrx)====================== date: Thu Jun 27 06:49:21 EDT 2024 ( mccune022.pppl.gov ) args: 45272Z38 run ==========(runtrx)====================== ==========(runtrx)====================== ==========TRANSP link & load============ ==========(runtrx)====================== date: Thu Jun 27 06:49:21 EDT 2024 ( mccune022.pppl.gov ) --> copy_expert_for: standard expert source copied to: 45272Z38ex.for --> copy_expert_for: up-to-date expert object copied to: 45272Z38ex.o **** uplink 45272Z38tr nolib check_xlibvars: setenv L_NAG (null) check_xlibvars: setenv L_MDESCR (null) check_xlibvars: setenv LMPI_FRANTIC(null) make: `/local/tr_cnichol2/transp_compute/MAST/45272Z38/45272Z38ex.o' is up to date. csh -f /local/tr_cnichol2/transp_compute/MAST/45272Z38/45272Z38tr.sh csh/linkload detected: C++ libraries requirement with f90 linkage ==>runtrx: TRANSP link successful ==========(runtrx)====================== ==========TRANSP execution============== date: Thu Jun 27 06:54:01 EDT 2024 ( mccune022.pppl.gov ) ==========(runtrx)====================== runtrx: Check File System runtrx: mpirun_option= true found proclist.dat %shell_server_exec: Testing file system ... %shell_server_exec: runid = 45272Z38 %shell_server_exec: dir0 = /local/tr_cnichol2/transp_compute/MAST/45272Z38 %shell_server_exec: dirN = /local/tr_cnichol2/transp_compute/MAST/45272Z38 %shell_server_exec: testfile = 45272Z38_23826_test.dat %shell_server_exec: not a parallel file system, did not find mccune030.pppl.gov:/local/tr_cnichol2/transp_compute/MAST/45272Z38/45272Z38_23826_test.dat %runtrx: TRANSP_EXEC_METHOD = 0 %runtrx: TRANSP_PARALLEL_FILESYS = NO ...in runtrx, MPI_CMD is: /usr/pppl/intel/2019-pkgs/openmpi-4.0.3/bin/mpiexec --bind-to none ...runtrx executing: /usr/pppl/intel/2019-pkgs/openmpi-4.0.3/bin/mpiexec --bind-to none -np 4 /l/mccune022/tr_cnichol2/transp_compute/MAST/45272Z38/45272Z38TR.EXE 45272Z38 ... %trmpi_init.f90: LOG_LEVEL env. var.: 1 %trmpi_init.f90: logfile_level: warn !trmpi_init.f90 (rank 0): MAX_MPI_INT_BLOCK environment variable: undefined. D efault value will be used. !trmpi_init.f90 (rank 0): MAX_MPI_R8_BLOCK environment variable: undefined. De fault value will be used. trmpi_init: NBI_NPROCS = 4 4 trmpi_init: NBI_NPROCS = 4 4 trmpi_init: NBI_NPROCS = 4 4 trmpi_init: NBI_NPROCS = 4 4 %trmpi_openlog: LOGFILE_LEVEL = warn DATE: Thu Jun 27 06:54:07 2024 TRANSP Version: 24.0.1 TRANSP DOI: 10.11578/dc.20180627.4 Build Date: 2023/10/21 namelist element value field(s): decimal point(s) inserted: DTMING DTMINT %NLIST: open namelist file45272Z38TR.ZDA %trcom_static_box: loading static data %trgdat: NLBCCW= F from PH.CDF file %trgdat: NLJCCW= T from PH.CDF file %trcom_allocate: reallocate: RLIM_PTS %trcom_allocate: reallocate: YLIM_PTS %trgdat: NMOM= 16 %DATCHK_MPI: NBI_PSERVE = 1 %trmpi_set_numprocs: TRANSP w/MPI linked in, numprocs= 4. ************************** **** TRANSP MPI MODE: **** ************************** TRANSP_NPROCS = 4 trmpi_env_update broadcast (cpu0): mpi_share_env done. %datchk: time dependent output resolution (sedit,stedit vs. time: "DTX") detected. %datchk: time dependent geometry timestep (dtmaxg vs. time: "DTG") detected. %datchk: time dependent source timestep (dt_sources vs. time: "DTS") detected. %datchk: NLFBM set to .TRUE., no option. %DATCHK: full equilibrium input DATCHK: CHECKING ARRAY DIMENSIONS, SWITCHES, ETC %DATCHK: NYXINV incremented to be odd: 101 161 %DATCHK: no ECH/ECCD, NLECH=F, %DATCHK: no Lower Hybrid, NLLH=F %DATCKA: ACfile times pre-screen... %DATCKA -- CHECKING NON-DEFAULT SPECIFICATIONS FOR AC FILE I/O GIVEN IN NAMELIST CHARACTER DATA ARRAYS "SELOUT" AND "SELAVG" %ASCXFIN -- AC FILE OPERATION COMPLETED SUCCESSFULLY. %LH_ONOFF: no LH on/off times found. %EC_ONOFF: no ECH on/off times found. %ICRF_ONOFF: no ICRF on/off times found. %NB_ONOFF: NBI on/off times (s): 4.6500E-01 4.8500E-01 ps_init_tag: Plasma State v3.000 f90 module initialization. AUXVAL-- INITITIALIZE shared data structures. %DATCKA: ACfile times pre-screen... arrays allocated in pt_diff_data_init arrays allocated in ptsolver_data_init MCINIT: RANDOM NUMBER GEN INITIALIZED - 496948609 496948609 %tabort_update: no namelist TABORT requests after t= 0.465000000000000 AUXVAL-- INITIALIZE PLOTTING OUTPUT SYSTEM AUXVAL-- INITIALIZE TEMPERATURE AND DENSITY PROFILES AUXVAL-- GEOMETRY INITIALIZATION PART 2. GFRAM0: bdy curvature ratio OK at t= 4.6750E-01 seconds: 8.4468E-02 GFRAM0: bdy curvature ratio OK at t= 4.6500E-01 seconds: 8.4468E-02 % MHDEQ: TG1= 0.465000 ; TG2= 0.467500 ; DTG= 2.500E-03 %treqbox_init_tr: clearing eqbox and loading tr attributes %treqbox_init_psirz: loading iso attributes for isolver psi(R,Z) analysis * MHD EQUILIBRIUM CALCULATED, CPU TIME = 9.7730E-03 SECONDS DATA R*BT AT EDGE: 4.7154E+01 ->EQBDY_CHECK: last flux surface curvature ratio is: 8.4468E-02 %get_rygrid: no grids for Psi(R,Y) %get_rygrid: no grids for Psi(R,Y) ====================================== Warning: large driven currents during startup (probably bootstrap current) Fraction of total current: 4.83185371184227 (reduced to 0.5) ====================================== dmg_datbuf_expand call from dmgini_sized: isize= 0 ...reading TF.PLN header data... ----------------------- %frantic_sorce1 -- resolution increased: previous: 20 ; now: 50 minimum resolution = min(50,nzones) ----------------------- *** FULL NEUTRAL SOURCE CALCULATION PERFORMED *** NSTEP= 0 TA= 3.65000E-01 CPU TIME= 1.35253E-01 SECONDS. DT= 1.00000E-03 %INITAL: pseudo time advanced to 3.660000E-01 %INITAL: pseudo time advanced to 3.672500E-01 %INITAL: pseudo time advanced to 3.688125E-01 %INITAL: pseudo time advanced to 3.707656E-01 %INITAL: pseudo time advanced to 3.732070E-01 %INITAL: pseudo time advanced to 3.756820E-01 %INITAL: pseudo time advanced to 3.781570E-01 %INITAL: pseudo time advanced to 3.806320E-01 %INITAL: pseudo time advanced to 3.831070E-01 %INITAL: pseudo time advanced to 3.855820E-01 % MHDEQ: TG1= 0.465000 ; TG2= 0.467500 ; DTG= 2.500E-03 * MHD EQUILIBRIUM CALCULATED, CPU TIME = 8.2980E-03 SECONDS DATA R*BT AT EDGE: 4.7154E+01 ->EQBDY_CHECK: last flux surface curvature ratio is: 8.4468E-02 %get_rygrid: no grids for Psi(R,Y) %nclass_geometry: Allocating module variables %nclass_geometry_mod: replacing geometry module variables in the ncbox %nclass_driver: Allocating module variables %nclass_driver_mod: replacing geometry module variables in the ncbox % MHDEQ: TG1= 0.465000 ; TG2= 0.467500 ; DTG= 2.500E-03 * MHD EQUILIBRIUM CALCULATED, CPU TIME = 7.8010E-03 SECONDS DATA R*BT AT EDGE: 4.7154E+01 ->EQBDY_CHECK: last flux surface curvature ratio is: 8.4468E-02 %get_rygrid: no grids for Psi(R,Y) *** FULL NEUTRAL SOURCE CALCULATION PERFORMED *** NSTEP= 0 TA= 3.85582E-01 CPU TIME= 1.15321E-01 SECONDS. DT= 2.47500E-03 %INITAL: pseudo time advanced to 3.880570E-01 %INITAL: pseudo time advanced to 3.905320E-01 %INITAL: pseudo time advanced to 3.930070E-01 %INITAL: pseudo time advanced to 3.954820E-01 %INITAL: pseudo time advanced to 3.979570E-01 %INITAL: pseudo time advanced to 4.004320E-01 %INITAL: pseudo time advanced to 4.029070E-01 %INITAL: pseudo time advanced to 4.053820E-01 % MHDEQ: TG1= 0.465000 ; TG2= 0.467500 ; DTG= 2.500E-03 * MHD EQUILIBRIUM CALCULATED, CPU TIME = 7.8180E-03 SECONDS DATA R*BT AT EDGE: 4.7154E+01 ->EQBDY_CHECK: last flux surface curvature ratio is: 8.4468E-02 %get_rygrid: no grids for Psi(R,Y) % MHDEQ: TG1= 0.465000 ; TG2= 0.467500 ; DTG= 2.500E-03 * MHD EQUILIBRIUM CALCULATED, CPU TIME = 8.3540E-03 SECONDS DATA R*BT AT EDGE: 4.7154E+01 ->EQBDY_CHECK: last flux surface curvature ratio is: 8.4468E-02 %get_rygrid: no grids for Psi(R,Y) *** FULL NEUTRAL SOURCE CALCULATION PERFORMED *** NSTEP= 0 TA= 4.05382E-01 CPU TIME= 1.23903E-01 SECONDS. DT= 2.47500E-03 %INITAL: pseudo time advanced to 4.078570E-01 %INITAL: pseudo time advanced to 4.103320E-01 %INITAL: pseudo time advanced to 4.128070E-01 %INITAL: pseudo time advanced to 4.152820E-01 %INITAL: pseudo time advanced to 4.177570E-01 %INITAL: pseudo time advanced to 4.202320E-01 %INITAL: pseudo time advanced to 4.227070E-01 %INITAL: pseudo time advanced to 4.251820E-01 % MHDEQ: TG1= 0.465000 ; TG2= 0.467500 ; DTG= 2.500E-03 * MHD EQUILIBRIUM CALCULATED, CPU TIME = 8.3990E-03 SECONDS DATA R*BT AT EDGE: 4.7154E+01 ->EQBDY_CHECK: last flux surface curvature ratio is: 8.4468E-02 %get_rygrid: no grids for Psi(R,Y) % MHDEQ: TG1= 0.465000 ; TG2= 0.467500 ; DTG= 2.500E-03 * MHD EQUILIBRIUM CALCULATED, CPU TIME = 8.4880E-03 SECONDS DATA R*BT AT EDGE: 4.7154E+01 ->EQBDY_CHECK: last flux surface curvature ratio is: 8.4468E-02 %get_rygrid: no grids for Psi(R,Y) *** FULL NEUTRAL SOURCE CALCULATION PERFORMED *** NSTEP= 0 TA= 4.25182E-01 CPU TIME= 1.15500E-01 SECONDS. DT= 2.47500E-03 %INITAL: pseudo time advanced to 4.276570E-01 %INITAL: pseudo time advanced to 4.301320E-01 %INITAL: pseudo time advanced to 4.326070E-01 %INITAL: pseudo time advanced to 4.350820E-01 %INITAL: pseudo time advanced to 4.375570E-01 %INITAL: pseudo time advanced to 4.400320E-01 %INITAL: pseudo time advanced to 4.425070E-01 %INITAL: pseudo time advanced to 4.449820E-01 %INITAL: pseudo time advanced to 4.474570E-01 % MHDEQ: TG1= 0.465000 ; TG2= 0.467500 ; DTG= 2.500E-03 * MHD EQUILIBRIUM CALCULATED, CPU TIME = 7.7720E-03 SECONDS DATA R*BT AT EDGE: 4.7154E+01 ->EQBDY_CHECK: last flux surface curvature ratio is: 8.4468E-02 %get_rygrid: no grids for Psi(R,Y) % MHDEQ: TG1= 0.465000 ; TG2= 0.467500 ; DTG= 2.500E-03 * MHD EQUILIBRIUM CALCULATED, CPU TIME = 7.7880E-03 SECONDS DATA R*BT AT EDGE: 4.7154E+01 ->EQBDY_CHECK: last flux surface curvature ratio is: 8.4468E-02 %get_rygrid: no grids for Psi(R,Y) *** FULL NEUTRAL SOURCE CALCULATION PERFORMED *** NSTEP= 0 TA= 4.47457E-01 CPU TIME= 1.26706E-01 SECONDS. DT= 2.47500E-03 %INITAL: pseudo time advanced to 4.499320E-01 %INITAL: pseudo time advanced to 4.524070E-01 %INITAL: pseudo time advanced to 4.548820E-01 %INITAL: pseudo time advanced to 4.573570E-01 %INITAL: pseudo time advanced to 4.598320E-01 %INITAL: pseudo time advanced to 4.623070E-01 %INITAL: pseudo time advanced to 4.647820E-01 sce_equil_init: Equilibration feature not active (noption_equil <= 0 in namelist). cpu time (sec) in nubeam_ctrl_init: 1.0320E-03 %nubeam_step ++++++++ nltrk_dep0 F %nubeam_step ++++++++ nlbout (lost ptcl.) F %nubeam_step ++++++++ nbsteps 0 ==> entering nubeam_step_child, mpi myidd = 0 nbi_interp_profiles... nbi_getprofiles ne*dvol sum (input): 3.5923E+20 nbi_getprofiles ne*dvol sum (ions): 3.5923E+20 nbstart... % nbi_alloc2_init: nbi_alloc2 done % nbi_states: fld_states write OK to filename: 45272Z38_fi/45272Z38_debug_nbi_ fld_state.cdf ADAS310_INIT: /p/pshare/transp/adas ADAS310_INIT: /p/pshare/transp/adas ADAS310_INIT: /p/pshare/transp/adas ADAS310_INIT: /p/pshare/transp/adas %fi_finish: enter %fimain: eflux cpu time = 8.000000001118224E-006 %neutrals: BOTH beam halo and recombination sources are present. *** FULL NEUTRAL SOURCE CALCULATION PERFORMED *** NSTEP= 1 TA= 4.65000E-01 CPU TIME= 1.71683E-01 SECONDS. DT= 2.47500E-03 %check_save_state: SLURM_JOB_ID = 6263625 %check_save_state: QSHARE= /p/transpgrid/qshare %check_save_state: nbflag = T %check_save_state: iwrite_now = T %check_save_state: check at wall_hours = 6.117777778172240E-003 %check_save_state: izleft hours = 79.9111111111111 %wrstf: start call wrstf. %wrstf: open new restart file:45272Z38RS.DAT %wrstf: open45272Z38RS.DAT_NEW, status= 0 %wrstf: record, ier= 1 (ier=1, OK) %wrstf: psload_save %ps_rezone_chk: no rezone operator available (no MHD equilibrium). %ps_rezone_chk: no rezone operator available (no MHD equilibrium). %ps_rezone_chk: no rezone operator available (no MHD equilibrium). %ps_rezone_chk: no rezone operator available (no MHD equilibrium). %wrstf: write marker file. %wrstf: transp_rplot_state_backup % RESTART RECORD WRITTEN AT TA= 4.6500000E-01 arrays allocated in pt_diff_data_init arrays allocated in ptsolver_data_init %WRSTF: virtual memory size = 1.917E+03 MB. --> plasma_hash("gframe"): TA= 4.650000E-01 NSTEP= 1 Hash code: 9688393 ->PRGCHK: bdy curvature ratio at t= 4.6633E-01 seconds is: 8.4468E-02 % MHDEQ: TG1= 0.465000 ; TG2= 0.466333 ; DTG= 1.333E-03 * MHD EQUILIBRIUM CALCULATED, CPU TIME = 9.4130E-03 SECONDS DATA R*BT AT EDGE: 4.7154E+01 ->EQBDY_CHECK: last flux surface curvature ratio is: 8.4468E-02 %get_rygrid: no grids for Psi(R,Y) % GFRAME - GEOMETRY TIMESTEP TG1= 0.465000 TO TG2= 0.466333 @ NSTEP 1 GFRAME TG2 MOMENTS CHECKSUM: 1.7384862086382D+04 GASFL called from sbrtn pbal GASFL called from sbrtn pbal %nclass_geometry: Deallocating module variables %nclass_geometry: Allocating module variables %nclass_geometry_mod: replacing geometry module variables in the ncbox %nclass_driver: Deallocating module variables %nclass_driver: Allocating module variables %nclass_driver_mod: replacing geometry module variables in the ncbox %MFRCHK - LABEL "BALE0_SGF", # 5= 7.75924E-38 RESET TO ZERO %MFRCHK - LABEL "BALE0_GF_D", # 5= 7.75924E-38 RESET TO ZERO --> plasma_hash("gframe"): TA= 4.663333E-01 NSTEP= 2 Hash code: 66465808 ->PRGCHK: bdy curvature ratio at t= 4.6867E-01 seconds is: 8.4468E-02 % MHDEQ: TG1= 0.466333 ; TG2= 0.468667 ; DTG= 2.333E-03 * MHD EQUILIBRIUM CALCULATED, CPU TIME = 8.4130E-03 SECONDS DATA R*BT AT EDGE: 4.7154E+01 ->EQBDY_CHECK: last flux surface curvature ratio is: 8.4468E-02 %get_rygrid: no grids for Psi(R,Y) % GFRAME - GEOMETRY TIMESTEP TG1= 0.466333 TO TG2= 0.468667 @ NSTEP 2 GFRAME TG2 MOMENTS CHECKSUM: 1.7384862086382D+04 --> plasma_hash("gframe"): TA= 4.686667E-01 NSTEP= 3 Hash code: 7669608 ->PRGCHK: bdy curvature ratio at t= 4.7100E-01 seconds is: 8.4468E-02 % MHDEQ: TG1= 0.468667 ; TG2= 0.471000 ; DTG= 2.333E-03 * MHD EQUILIBRIUM CALCULATED, CPU TIME = 8.3490E-03 SECONDS DATA R*BT AT EDGE: 4.7154E+01 ->EQBDY_CHECK: last flux surface curvature ratio is: 8.4468E-02 %get_rygrid: no grids for Psi(R,Y) % GFRAME - GEOMETRY TIMESTEP TG1= 0.468667 TO TG2= 0.471000 @ NSTEP 3 GFRAME TG2 MOMENTS CHECKSUM: 1.7384862086382D+04 --> plasma_hash("gframe"): TA= 4.710000E-01 NSTEP= 4 Hash code: 80405001 ->PRGCHK: bdy curvature ratio at t= 4.7333E-01 seconds is: 8.4468E-02 % MHDEQ: TG1= 0.471000 ; TG2= 0.473333 ; DTG= 2.333E-03 * MHD EQUILIBRIUM CALCULATED, CPU TIME = 8.5450E-03 SECONDS DATA R*BT AT EDGE: 4.7154E+01 ->EQBDY_CHECK: last flux surface curvature ratio is: 8.4468E-02 %get_rygrid: no grids for Psi(R,Y) % GFRAME - GEOMETRY TIMESTEP TG1= 0.471000 TO TG2= 0.473333 @ NSTEP 4 GFRAME TG2 MOMENTS CHECKSUM: 1.7384862086382D+04 --> plasma_hash("gframe"): TA= 4.733333E-01 NSTEP= 5 Hash code: 74058569 ->PRGCHK: bdy curvature ratio at t= 4.7567E-01 seconds is: 8.4468E-02 % MHDEQ: TG1= 0.473333 ; TG2= 0.475667 ; DTG= 2.333E-03 * MHD EQUILIBRIUM CALCULATED, CPU TIME = 8.3320E-03 SECONDS DATA R*BT AT EDGE: 4.7154E+01 ->EQBDY_CHECK: last flux surface curvature ratio is: 8.4468E-02 %get_rygrid: no grids for Psi(R,Y) % GFRAME - GEOMETRY TIMESTEP TG1= 0.473333 TO TG2= 0.475667 @ NSTEP 5 GFRAME TG2 MOMENTS CHECKSUM: 1.7384862086382D+04 %MFRCHK - LABEL "BALE0_SGF", # 5= 7.75924E-38 RESET TO ZERO %MFRCHK - LABEL "BALE0_GF_D", # 5= 7.75924E-38 RESET TO ZERO --> plasma_hash("gframe"): TA= 4.756667E-01 NSTEP= 6 Hash code: 62346632 ->PRGCHK: bdy curvature ratio at t= 4.7800E-01 seconds is: 8.4468E-02 % MHDEQ: TG1= 0.475667 ; TG2= 0.478000 ; DTG= 2.333E-03 * MHD EQUILIBRIUM CALCULATED, CPU TIME = 8.4020E-03 SECONDS DATA R*BT AT EDGE: 4.7154E+01 ->EQBDY_CHECK: last flux surface curvature ratio is: 8.4468E-02 %get_rygrid: no grids for Psi(R,Y) % GFRAME - GEOMETRY TIMESTEP TG1= 0.475667 TO TG2= 0.478000 @ NSTEP 6 GFRAME TG2 MOMENTS CHECKSUM: 1.7384862086382D+04 --> plasma_hash("gframe"): TA= 4.780000E-01 NSTEP= 7 Hash code: 102531391 ->PRGCHK: bdy curvature ratio at t= 4.8033E-01 seconds is: 8.4468E-02 % MHDEQ: TG1= 0.478000 ; TG2= 0.480333 ; DTG= 2.333E-03 * MHD EQUILIBRIUM CALCULATED, CPU TIME = 8.3450E-03 SECONDS DATA R*BT AT EDGE: 4.7154E+01 ->EQBDY_CHECK: last flux surface curvature ratio is: 8.4468E-02 %get_rygrid: no grids for Psi(R,Y) % GFRAME - GEOMETRY TIMESTEP TG1= 0.478000 TO TG2= 0.480333 @ NSTEP 7 GFRAME TG2 MOMENTS CHECKSUM: 1.7384862086382D+04 --> plasma_hash("gframe"): TA= 4.803333E-01 NSTEP= 8 Hash code: 110765212 ->PRGCHK: bdy curvature ratio at t= 4.8267E-01 seconds is: 8.4468E-02 % MHDEQ: TG1= 0.480333 ; TG2= 0.482667 ; DTG= 2.333E-03 * MHD EQUILIBRIUM CALCULATED, CPU TIME = 8.3230E-03 SECONDS DATA R*BT AT EDGE: 4.7154E+01 ->EQBDY_CHECK: last flux surface curvature ratio is: 8.4468E-02 %get_rygrid: no grids for Psi(R,Y) % GFRAME - GEOMETRY TIMESTEP TG1= 0.480333 TO TG2= 0.482667 @ NSTEP 8 GFRAME TG2 MOMENTS CHECKSUM: 1.7384862086382D+04 --> plasma_hash("gframe"): TA= 4.826667E-01 NSTEP= 9 Hash code: 76418476 ->PRGCHK: bdy curvature ratio at t= 4.8500E-01 seconds is: 8.4468E-02 % MHDEQ: TG1= 0.482667 ; TG2= 0.485000 ; DTG= 2.333E-03 * MHD EQUILIBRIUM CALCULATED, CPU TIME = 9.1390E-03 SECONDS DATA R*BT AT EDGE: 4.7154E+01 ->EQBDY_CHECK: last flux surface curvature ratio is: 8.4468E-02 %get_rygrid: no grids for Psi(R,Y) % GFRAME - GEOMETRY TIMESTEP TG1= 0.482667 TO TG2= 0.485000 @ NSTEP 9 GFRAME TG2 MOMENTS CHECKSUM: 1.7384862086382D+04 %MFRCHK - LABEL "BALE0_SGF", # 5= 7.75924E-38 RESET TO ZERO %MFRCHK - LABEL "BALE0_GF_D", # 5= 7.75924E-38 RESET TO ZERO ual_close_pulse: [UALLowlevelException = Cannot find context -1 in store] tr_ids_eq_close: can not close IMAS output files 4.2 Call trmpi_end (NORMAL EXIT) trmpi_end2 -I- 0 Ended MPI for TRANSP 4.2 TERMINATE THE RUN (NORMAL EXIT) CPU TIME USED (hours): 5.75498E-03 %kill_nubeam_server: no server READY file found. ------------ stderr ---------------- (mpi_share_env) process myid= 0 cwd: /local/tr_cnichol2/transp_compute/MAST/45272Z38 (mpi_share_env) process myid= 2 cwd: /local/tr_cnichol2/transp_compute/MAST/45272Z38 (mpi_share_env) process myid= 1 cwd: /local/tr_cnichol2/transp_compute/MAST/45272Z38 (mpi_share_env) process myid= 3 cwd: /local/tr_cnichol2/transp_compute/MAST/45272Z38 %nbatom deposition model: lev_nbidep= 2 %nbatom deposition model: nsigexc= 3 %nbatom deposition model: lev_nbidep= 2 %nbatom deposition model: nsigexc= 3 %nbatom deposition model: lev_nbidep= 2 %nbatom deposition model: nsigexc= 3 %nbatom deposition model: lev_nbidep= 2 %nbatom deposition model: nsigexc= 3 depall... depall... depall... depall... %depall depall_mpi_split initinal done %depall nuse(isb)= 0 %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 20 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 19 %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 17 ...intercept(s) at inside major radius ignored! ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 18 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 17 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 %xjaset-- too many orbit intercepts, recovery attempt ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 18 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 18 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 18 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 17 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 18 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 17 %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 18 %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 20 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 16 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 20 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 20 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 18 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 17 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 18 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 17 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 16 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 20 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 19 %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 16 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 17 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts found; jdep= 19 ...intercept(s) at inside major radius ignored! %xjaset-- too many orbit intercepts, recovery attempt %depall specie #1 -> 0 - 0 (killed) + 1000 (dep) = 1000 ptcls. depall exited 0 orball... depall exited 0 depall exited 0 orball... depall exited 0 orball... orball... orball exited 0 orball exited 0 orball exited 0 orball exited 0 nbfinish... entering outptb2 ==> exiting nubeam_step_child, mpi myidd = 2 ==> exiting nubeam_step_child, mpi myidd = 1 ==> exiting nubeam_step_child, mpi myidd = 3 exited outptb2 entering nbo_load exit nbo_load exit nbfinish... ==> exiting nubeam_step_child, mpi myidd = 0 nubeam_load_state... nubeam_step: levmod_halo= 0 %nbi_states: cpu 3 virtual memory size = 1.537E+03 MB. %nbi_states: cpu 1 virtual memory size = 1.479E+03 MB. %nbi_states: cpu 2 virtual memory size = 1.479E+03 MB. % nbi_states: fld_states write OK to filename: 45272Z38_fi/45272Z38_nbi_fld_st ate.cdf trmpi_listener: service request "EXIT" on cpu# 1 trmpi_listener: service request "EXIT" on cpu# 3 trmpi_listener: service request "EXIT" on cpu# 2 ==>runtrx: TRANSP run successful ==========(runtrx)====================== ==========TRANSP output conversion====== date: Thu Jun 27 06:54:39 EDT 2024 ( mccune022.pppl.gov ) ==========(runtrx)====================== srart tr_finish_mpi.pl false pppl.gov 45272Z38 MAST tr_finish_mpi.pl 45272Z38 MAST ---------------> starting: plotcon 45272Z38 2024/06/27:06:54:39 %PoPlot -- reading .PLN files %POPLT2-- PROCESSING RUN 45272Z38 SHOT NO. 45272 EXPECT 473 SCALAR FCNS, 994 PROFILE FCNS OF TIME "MF" FILE RECORD SIZE = 100 WORDS (FLOATING PT) dmg_datbuf_expand call from dmgini_sized: isize= 0 45272Z38MF.PLN size = 6.8M [mds_cache_disable: MDS+ cache disabled.] dmg_datbuf_expand call from dmgini_sized: isize= 0 (retry folding filename to lowercase) ...reading TF.PLN header data... cdfcon: NETcdf file datestamp : Thu Jun 27 06:54:40 2024 build_date: call getenv build_date: call ufopen xshare_build.dat cdfcon: Transp common build date : Fri May 3 15:19:16 EDT Define Dimensions 12 define Scalar Fct 473 Define Multi Graphs 426 Write Profiles 994 X 1 1 100 XB 2 2 100 THETA 3 7 80 RMJSYM 4 20 405 RMAJM 5 22 201 MCINDX 6 23 220 ILIM 7 25 98 INDEX_MSE 8 67 30 RGRID 9 864 51 ZGRID 10 865 51 PSIRZ 11 866 2601 %dmgxot_spredm: non-monotonic X axis: #increasing steps: 894 avg & max steps: 3.4702E-03 8.9952E-03 #decreasing steps: 1329 avg & max steps: 2.3343E-03 4.3380E-03 #zero steps: 5577 B_FIELD 12 867 7803 %dmgxot_spredm: non-monotonic X axis: #increasing steps: 9020 avg & max steps: 3.0591E-02 3.0263E-01 #decreasing steps: 3280 avg & max steps: 8.4124E-02 1.8394E+00 #zero steps: 11106 read NF File : 474 473 Write Multigraph: 426 ...readback test of .CDF file... 1895 variables, 14 dimensions 15 att ...header check SUCCESSFUL; now check data. ...check profile data... plotcon: CDF files in /local/tr_cnichol2/transp_compute/MAST/45272Z38 /local/tr_cnichol2/transp_compute/MAST/45272Z38/45272Z38.CDF /local/tr_cnichol2/transp_compute/MAST/45272Z38/45272Z38PH.CDF %targz_pseq: no directory: 45272Z38_replay (normal exit) %targz_solv: in /local/tr_cnichol2/transp_compute/MAST/45272Z38 on host mccune022 %targz_solv: no TGLF debug info found (normal exit) %targz_solv: no TGLF debug info found (normal exit) --------------->plotcon: normal exit. 2024/06/27:06:54:40 ==>runtrx: TRANSP postprocessing OK ==========(runtrx)====================== ==========TRANSP finish and cleanup===== date: Thu Jun 27 06:54:40 EDT 2024 ( mccune022.pppl.gov ) ==========(runtrx)====================== %finishup -I- pppl.gov production run %finishup: copying TRANSP permanent output files to /u/tr_cnichol2/transp/result/MAST.14 acsort.py: No match. tar 45272Z38CC.TMP mv 45272Z38CC.TMP /u/tr_cnichol2/transp/result/MAST.14/45272Z38CC.TMP tar 45272Z38.CDF mv 45272Z38.CDF /u/tr_cnichol2/transp/result/MAST.14/45272Z38.CDF tar 45272Z38ex.for mv 45272Z38ex.for /u/tr_cnichol2/transp/result/MAST.14/45272Z38ex.for tar 45272Z38_MAST.REQUEST mv 45272Z38_MAST.REQUEST /u/tr_cnichol2/transp/result/MAST.14/45272Z38_MAST.REQUEST tar 45272Z38_nubeam_init.dat mv 45272Z38_nubeam_init.dat /u/tr_cnichol2/transp/result/MAST.14/45272Z38_nubeam_init.dat tar 45272Z38PH.CDF mv 45272Z38PH.CDF /u/tr_cnichol2/transp/result/MAST.14/45272Z38PH.CDF mv 45272Z38.target /u/tr_cnichol2/transp/result/MAST.14/45272Z38.target tar 45272Z38TR.DAT mv 45272Z38TR.DAT /u/tr_cnichol2/transp/result/MAST.14/45272Z38TR.DAT mv 45272Z38.trexe /u/tr_cnichol2/transp/result/MAST.14/45272Z38.trexe tar 45272Z38TR.INF mv 45272Z38TR.INF /u/tr_cnichol2/transp/result/MAST.14/45272Z38TR.INF tar 45272Z38tr.log cp 45272Z38tr.log /u/tr_cnichol2/transp/result/MAST.14/45272Z38tr.log tar 45272Z38TR.MSG mv 45272Z38TR.MSG /u/tr_cnichol2/transp/result/MAST.14/45272Z38TR.MSG tar 45272Z38.yml mv 45272Z38.yml /u/tr_cnichol2/transp/result/MAST.14/45272Z38.yml rm: No match. %finishup: cp -f /local/tr_cnichol2/transp_tmp/MAST.14_45272Z38.tar.gz /u/tr_cnichol2/transp/result/MAST.14/MAST.14_45272Z38.tar.gz %finishup: wrote /u/tr_cnichol2/transp/result/MAST.14/MAST.14_45272Z38.FILESREADY ==========(runtrx)====================== ==========>runtrx normal exit<========== date: Thu Jun 27 06:54:42 EDT 2024 ( mccune022.pppl.gov ) ==========>runtrx runsite = pppl.gov<======