==>runtrx start: date: Wed Jun 26 13:21:50 EDT 2024 ( mccune020.pppl.gov ) argv = 2 iarg = 2 cmd_opt = pre runtrx: tok.yy = NSTX.10 ==========(runtrx)====================== date: Wed Jun 26 13:21:50 EDT 2024 ( mccune020.pppl.gov ) args: 141340J11 pre ==========(runtrx)====================== ==========(runtrx)====================== ==========TRANSP preprocessing========== date: Wed Jun 26 13:21:50 EDT 2024 ( mccune020.pppl.gov ) ==========check for 141340J11_mdsmark.sh=== ==========(runtrx)====================== ==========TRDAT execution=============== date: Wed Jun 26 13:21:50 EDT 2024 ( mccune020.pppl.gov ) TRDAT TRANSP Version: 24.3.0 TRANSP DOI: 10.11578/dc.20180627.4 Build Date: 2024/06/21 %trmpi_init.f90: LOG_LEVEL env. var.: 1 %trmpi_init.f90: logfile_level: warn (mpi_share_env) process myid= 0 cwd: /local/tr_anelson/transp_compute/NSTX/141340J11 CTOKNM : Cdir = /local/tr_anelson/transp_compute/NSTX/141340J11/ % DIRECTORY IS /local/tr_anelson/transp_compute/NSTX/141340J11/; TOKAMAK ID SET TO NSTX %trmpi_openlog: LOGFILE_LEVEL = warn %splitn_module: update block detected, t= 0.200000000000000 namelist elements assigned the same value more than once: XYBAPA XYBSCA namelist element value field(s): decimal point(s) inserted: DTMING GOOCON %NLIST: open namelist file141340J11TR.ZDA %trcom_static_box: loading static data %mds_setup: setting MDSplus server to: TRANSPGRID.PPPL.GOV %mds_setup: server set OK. %mds_setup: MDSplus opening tree: TRANSP_NSTX 1413401011 %mds_setup: MDSplus tree open status: 265389633 -----------> entering UF0GET. %UF0DRD: DIMENSIONALITY OF INPUT FILE = 2 % NO. OF BEAMS (NB2 DATA) = 3 %UF0DRD: DIMENSIONALITY OF INPUT FILE = 3 UF0GET: -> Btor is clockwise from BTOR_CCW scalar in MMX data. UF0GET: -> Itor is counter-clockwise from ITOR_CCW scalar in MMX data. UF0GET: MMX max exponent: 2 %UF0GET -- finished. %DATCHK: full equilibrium input DATCHK: CHECKING ARRAY DIMENSIONS, SWITCHES, ETC %TIME DEPENDENT FAST ION ANOM. DIFFUSION CONTROLS DETECTED! %DATCHK: NYXINV incremented to be odd: 101 161 %DATCHK: no ECH/ECCD, NLECH=F, %DATCHK: no Lower Hybrid, NLLH=F TIDXSW defaulted: value of 0.05 assigned. %DATCHK warning: RFRAC defaulted. %DATCKICH -- NLICRF=F so force NICHA=0 %DATCKA: ACfile times pre-screen... %DATCKA -- CHECKING NON-DEFAULT SPECIFICATIONS FOR AC FILE I/O GIVEN IN NAMELIST CHARACTER DATA ARRAYS "SELOUT" AND "SELAVG" %ASCXFIN -- AC FILE OPERATION COMPLETED SUCCESSFULLY. dummy trdatusub vsn trgdat_check called (OK). dummy trdatusub vsn trgdat_psload called (OK). *UTRCHK: CHECKING TRDAT NAMELIST SPECIFICATIONS. %UTRCHK: full equilibrium input *DDEFIN: SET UP PHYSICS DATA FOR ANALYSIS: TIME RANGE IS TINIT= 3.5000E-02, FTIME= 4.1500E-01 SECONDS. SETSCD - SET SCALAR DATA FOR UPF SETTIM - SET UP TIMING INFORMATION FOR UPF *UF1GET: PROCESSING "CUR": plasma current amps ------------------- *UF1GET: PROCESSING "RBZ": [ext. B field] * R Tesla*cm ----------- *UF1GET: PROCESSING "DFL": diamagnetic flux Webers --------------- %SETDFLT: "GAS" INPUT DATA FILE NOT SPECIFIED ==>DEFAULT VALUE SUBSTITUTED, GASFLN = 0.0000E+00 *UF1GET: PROCESSING "NTX": Neutron flux n/sec -------------------- *UF1GET: PROCESSING "PLF": Poloidal flux Wb/rad ------------------ %CHKTIM: DATA TIME RANGE 3.0000E-02 TO 4.1500E-01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). *UF1GET: PROCESSING "TRF": Toroidal flux Webers ------------------ %CHKTIM: DATA TIME RANGE 3.0000E-02 TO 4.1500E-01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). *UF1GET: PROCESSING "VSF": surface voltage volts ----------------- %CHKTIM: DATA TIME RANGE 3.0000E-02 TO 4.1500E-01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). *UF1GET: PROCESSING "ZEF": Zeff ------------------------------- %CHKTIM: DATA TIME RANGE 1.6492E-01 TO 4.6493E-01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). *UF3GET: PROCESSING "MMX": Equilibrium moments cm ---------------- %FIXUNS: CONVERTING UFILE DATA UNITS, M , TO cm >CONVERSION FACTOR: * 100.000 %CHKTIM: DATA TIME RANGE 3.0000E-02 TO 4.1500E-01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %Geteq: MMX file does not cover time range of run; equilibrium geometry will be extrapolated flat to fill the time range ---> Geteq: #moments NMOM = 16 Geteq: Interpolate equilibrium data for UPF *UF2GET: PROCESSING "BOL": Power radiated W/cm**3 ---------------- %CHKTIM: DATA TIME RANGE 5.0000E-02 TO 4.7000E-01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %CKSETRD: NRIBOL=3 DATA: PLASMA COVERAGE CHECK: GREATEST LOWER BOUND (*) (R-R0)/A = -8.2532E-01 LEAST UPPER BOUND (*) (R-R0)/A = 1.1548E+00 *EXPECTED MINIMUM COVERAGE TO INCLUDE RANGE (R-R0)/A = -9.0000E-01 TO 9.0000E-01 AT ALL TIMES IN THE ANALYSIS. *REQUIREMENT RELAXED BY NAMELIST: XRCBOL= 1.000E+00 RMJCHK=-1.000E+00 %SETRD0: X VECTOR SET FROM UFILE *2-SIDED* MAJOR RADIUS DATA *UF2GET: PROCESSING "GRB": MHD g (R*Bt) profile Tesla*cm --------- %UF2GET -- INPUT UFILE AXES OUT OF ORDER, WILL SWAP: 1ST DIMENSION = " "; 2ND DIMENSION = "seconds " %FIXUNS: CONVERTING UFILE GRB DATA UNITS, TESLA*M , TO Tesla*cm >CONVERSION FACTOR: * 100.000 %CHKTIM: DATA TIME RANGE 3.0000E-02 TO 4.1500E-01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %SETDAT2-- X axis is normalized flux, not modified, npts= 41 *UF2GET: PROCESSING "NER": electron density n/cm**3 -------------- %CKSETRD: NRINER=3 DATA: PLASMA COVERAGE CHECK: GREATEST LOWER BOUND (*) (R-R0)/A = -8.2917E-01 LEAST UPPER BOUND (*) (R-R0)/A = 1.0960E+00 *EXPECTED MINIMUM COVERAGE TO INCLUDE RANGE (R-R0)/A = -9.0000E-01 TO 9.0000E-01 AT ALL TIMES IN THE ANALYSIS. *REQUIREMENT RELAXED BY NAMELIST: XRCNER= 1.000E+00 RMJCHK=-1.000E+00 %SETRD0: X VECTOR SET FROM UFILE *2-SIDED* MAJOR RADIUS DATA *UF2GET: PROCESSING "NIM": impurity density n/cm**3 -------------- %CHKTIM: DATA TIME RANGE 5.5081E-02 TO 4.6508E-01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %CKSETRD: NRINIM=1 DATA: PLASMA COVERAGE CHECK: GREATEST LOWER BOUND (*) (R-R0)/A = 3.6501E-01 LEAST UPPER BOUND (*) (R-R0)/A = 9.5827E-01 *EXPECTED MINIMUM COVERAGE TO INCLUDE RANGE (R-R0)/A = 1.0000E-01 TO 9.0000E-01 AT ALL TIMES IN THE ANALYSIS. *REQUIREMENT RELAXED BY NAMELIST: XRCNIM= 1.000E+00 RMJCHK=-1.000E+00 %SETRD0: X VECTOR SET FROM UFILE *OUTSIDE* MAJOR RADIUS DATA *UF2GET: PROCESSING "PRS": MHD Pressure profile Pascals ---------- %UF2GET -- INPUT UFILE AXES OUT OF ORDER, WILL SWAP: 1ST DIMENSION = " "; 2ND DIMENSION = "seconds " %CHKTIM: DATA TIME RANGE 3.0000E-02 TO 4.1500E-01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %SETDAT2-- X axis is normalized flux, not modified, npts= 41 *UF2GET: PROCESSING "QPR": q profile --------------------------- %UF2GET -- INPUT UFILE AXES OUT OF ORDER, WILL SWAP: 1ST DIMENSION = " "; 2ND DIMENSION = "seconds " %CHKTIM: DATA TIME RANGE 3.0000E-02 TO 4.1500E-01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %SETDAT2-- X axis is normalized flux, not modified, npts= 41 *UF2GET: PROCESSING "TER": electron temperature eV --------------- %CKSETRD: NRITER=3 DATA: PLASMA COVERAGE CHECK: GREATEST LOWER BOUND (*) (R-R0)/A = -8.2917E-01 LEAST UPPER BOUND (*) (R-R0)/A = 1.0960E+00 *EXPECTED MINIMUM COVERAGE TO INCLUDE RANGE (R-R0)/A = -9.0000E-01 TO 9.0000E-01 AT ALL TIMES IN THE ANALYSIS. *REQUIREMENT RELAXED BY NAMELIST: XRCTER= 1.000E+00 RMJCHK=-1.000E+00 %SETRD0: X VECTOR SET FROM UFILE *2-SIDED* MAJOR RADIUS DATA *UF2GET: PROCESSING "TI2": ion temperature eV -------------------- %CHKTIM: DATA TIME RANGE 5.5081E-02 TO 4.6508E-01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %CKSETRD: NRITI2=1 DATA: PLASMA COVERAGE CHECK: GREATEST LOWER BOUND (*) (R-R0)/A = 3.6501E-01 LEAST UPPER BOUND (*) (R-R0)/A = 9.5827E-01 *EXPECTED MINIMUM COVERAGE TO INCLUDE RANGE (R-R0)/A = 1.0000E-01 TO 9.0000E-01 AT ALL TIMES IN THE ANALYSIS. *REQUIREMENT RELAXED BY NAMELIST: XRCTI2= 1.000E+00 RMJCHK=-1.000E+00 %SETRD0: X VECTOR SET FROM UFILE *OUTSIDE* MAJOR RADIUS DATA *UF2GET: PROCESSING "VP2": plasma rotation rad/sec --------------- %CHKTIM: DATA TIME RANGE 5.5081E-02 TO 4.6508E-01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %CKSETRD: NRIVP2=1 DATA: PLASMA COVERAGE CHECK: GREATEST LOWER BOUND (*) (R-R0)/A = 3.6501E-01 LEAST UPPER BOUND (*) (R-R0)/A = 9.5827E-01 *EXPECTED MINIMUM COVERAGE TO INCLUDE RANGE (R-R0)/A = 1.0000E-01 TO 9.0000E-01 AT ALL TIMES IN THE ANALYSIS. *REQUIREMENT RELAXED BY NAMELIST: XRCVP2= 1.000E+00 RMJCHK=-1.000E+00 %SETRD0: X VECTOR SET FROM UFILE *OUTSIDE* MAJOR RADIUS DATA *DDEFIN: Set Plasma Heating parameters :- ========================== -> entering setnbi (neutral beam powers, voltages, etc.) SETNBI - SET UP NEUTRAL BEAM DATA FOR UPF *UF2GET: PROCESSING "NB2": beam heating data ------------------- %SETNBI- BEAM FULL ENERGY FRACTIONS SET BY NBI FILE ** %SETNBI- BEAM HALF ENERGY FRACTIONS SET BY NBI FILE ** %setnbi: NBI on/off times taken from data. %NB_ONOFF: NBI on/off times (s): 4.2250E-02 4.9355E-01 Zeff vs. time only: Zeff vs. time input data provided. %SETDFLT: "DTG" INPUT DATA FILE NOT SPECIFIED ==>DEFAULT VALUE SUBSTITUTED, DTMAXG = 2.0000E-03 %setmisc -- time dependent geometry timestep enabled (ZOOM is off). %SETDFLT: "DTS" INPUT DATA FILE NOT SPECIFIED ==>DEFAULT VALUE SUBSTITUTED, DT_SOURCES = 3.0000E-03 %setmisc -- time dependent source timestep enabled (ZOOM is off). %SETDFLT: "DTX" INPUT DATA FILE NOT SPECIFIED ==>DEFAULT VALUE SUBSTITUTED, DT_OUTPUT = 2.0000E-03 %setmisc -- time dependent output timestep enabled (ZOOM is off). %TDB_EXECSYM: PRESYMMETRIZE THE "TER" DATA WARNING - HOLLOW DATA PROFILE DETECTED SR TDB_PRFINV WARNING - HOLLOW DATA PROFILE DETECTED SR TDB_PRFINV -------------------------------------------------- %trdat_bdy_check -- checking plasma boundary data trdat_bdy_check: OK ...min(r_curvature/(Rmax-Rmin)) is: 3.827477953030085E-002 ...at time t= 0.231000000000000 seconds. ------------> thermal ion ptcl balance summary: Hydrogen NDEFINE=0 NMODEL=1 RC=Tau(p) GF=ZERO Deuterium NDEFINE=0 NMODEL=1 RC=Tau(p) GF=ZERO Tritium (absent) Helium-3 (absent) Helium-4 (absent) Lithium-6 (absent) Recycling fractions RFRAC defaulted. ------------------------------------ Fast ion summary: Beam species: D Fusion product species: (None) Minority RF species: (None) ------------------------------------ In TRDAT: calling COPY_PTNML COPY_PTNML_SUB: namelist: pt_template= " /p/omfit/tmp/jlestz/TRANSP/141340J11_tmp/141340J11_input_pt.nml" COPY_PTNML_SUB: PT_SOLVER namelist file= /p/omfit/tmp/jlestz/TRANSP/141340J11_tmp/141340J11_input_pt.nml COPY_PTNML_SUB: zcmd= cp /p/omfit/tmp/jlestz/TRANSP/141340J11_tmp/141340J11_input_pt.nml ./141340J11_ pt.nml COPY_PTNML_SUB: file copy status (0 is normal): 0 In TRDAT: calling COPY_TGLFNML COPY_TGLF_SUB: namelist: tglf_template= " /p/omfit/tmp/jlestz/TRANSP/141340J11_tmp/141340J11_input_tglf.nml" COPY_TGLF_SUB: TGLF namelist file= /p/omfit/tmp/jlestz/TRANSP/141340J11_tmp/141340J11_input_tglf.nml COPY_TGLF_SUB: zcmd= cp /p/omfit/tmp/jlestz/TRANSP/141340J11_tmp/141340J11_input_tglf.nml ./141340J1 1_tglf.nml COPY_TGLF_SUB: file copy status (0 is normal): 0 ==========(runtrx TRDAT sts = 0)====== ==>runtrx: trdat execution successful will write to mdsplus later ==========LABEL execution=============== date: Wed Jun 26 13:22:00 EDT 2024 ( mccune020.pppl.gov ) ==>runtrx: label execution successful ==========add TF.PLN to MDSplus ======== ==========(runtrx)====================== date: Wed Jun 26 13:22:01 EDT 2024 ( mccune020.pppl.gov ) ************************************************************************ Program: mds_start Version: v0.3.2 Revision: 953b182 Date: 03/20/2024 ************************************************************************ mds_conopn: option = 4 1413401011 TRANSP_NSTX ...connecting to server: TRANSPGRID.PPPL.GOV ...tcl("EDIT TRANSP_NSTX/SHOT=1413401011") nid = 161 open 141340J11TF.PLN add_file: 6484 lines - 63 tcl("WRITE") stat = 1 ==========add PH.CDF to MDSplus ======== ==========(runtrx)====================== date: Wed Jun 26 13:22:02 EDT 2024 ( mccune020.pppl.gov ) ==>runtrx: LINK_ON_HOST environment variable detected. ==========(runtrx)====================== ==========>runtrx normal exit<========== date: Wed Jun 26 13:22:02 EDT 2024 ( mccune020.pppl.gov )