==>runtrx start: date: Mon Apr 14 10:01:29 EDT 2025 ( mccune001.pppl.gov ) argv = 2 iarg = 2 cmd_opt = pre runtrx: tok.yy = ST40.24 ==========(runtrx)====================== date: Mon Apr 14 10:01:29 EDT 2025 ( mccune001.pppl.gov ) args: 00425E15 pre ==========(runtrx)====================== ==========(runtrx)====================== ==========TRANSP preprocessing========== date: Mon Apr 14 10:01:29 EDT 2025 ( mccune001.pppl.gov ) ==========check for 00425E15_mdsmark.sh=== ==========(runtrx)====================== ==========TRDAT execution=============== date: Mon Apr 14 10:01:29 EDT 2025 ( mccune001.pppl.gov ) TRDAT TRANSP Version: 24.0.1 TRANSP DOI: 10.11578/dc.20180627.4 Build Date: 2023/10/21 %trmpi_init.f90: LOG_LEVEL env. var.: 1 %trmpi_init.f90: logfile_level: warn (mpi_share_env) process myid= 0 cwd: /local/tr_xzhang/transp_compute/ST40/00425E15 CTOKNM : Cdir = /local/tr_xzhang/transp_compute/ST40/00425E15/ % DIRECTORY IS /local/tr_xzhang/transp_compute/ST40/00425E15/; TOKAMAK ID SET TO ST40 %trmpi_openlog: LOGFILE_LEVEL = warn %splitn_module: update block detected, t= 40.0000000000000 namelist elements assigned the same value more than once: DTBEAM namelist element value field(s): decimal point(s) inserted: DTECH EDGENE TECHOFF POWECH FREQECH TECHON XECECH PHECECH THETECH PHAIECH RFMODECH FE_OUTTIM TONICHA APROF_AXIS_VALUE_TER APROF_AXIS_VALUE_TI2 APROF_AXIS_VALUE_QPR ZECECH %NLIST: open namelist file00425E15TR.ZDA %trcom_static_box: loading static data %mds_setup: setting MDSplus server to: TRANSPGRID.PPPL.GOV %mds_setup: server set OK. %mds_setup: MDSplus opening tree: TRANSP_ST40 4250515 %mds_setup: MDSplus tree open status: 265389633 -----------> entering UF0GET. %UF0DRD: DIMENSIONALITY OF INPUT FILE = 3 UF0GET: -> Btor is counter-clockwise from BTOR_CCW scalar in MMX data. UF0GET: -> Itor is counter-clockwise from ITOR_CCW scalar in MMX data. UF0GET: MMX max exponent: 2 %UF0GET -- finished. %DATCHK: full equilibrium input DATCHK: CHECKING ARRAY DIMENSIONS, SWITCHES, ETC %DATCHK: NYXINV incremented to be odd: 101 161 %DATCHK: no Lower Hybrid, NLLH=F %DATCKICH -- NLICRF=F so force NICHA=0 %DATCKA: ACfile times pre-screen... %DATCKA -- CHECKING NON-DEFAULT SPECIFICATIONS FOR AC FILE I/O GIVEN IN NAMELIST CHARACTER DATA ARRAYS "SELOUT" AND "SELAVG" %ASCXFIN -- AC FILE OPERATION COMPLETED SUCCESSFULLY. NLICRF=.FALSE., FRMINI set to 0.0! dummy trdatusub vsn trgdat_check called (OK). dummy trdatusub vsn trgdat_psload called (OK). *UTRCHK: CHECKING TRDAT NAMELIST SPECIFICATIONS. %UTRCHK: full equilibrium input %UTRCHK -- SURFACE VOLTAGE DATA SHOULD BE PROVIDED WHEN USING BP/BT OR MHD OR Q INPUT DATA TO CONTROL THE EVOLUTION OF THE CURRENT PROFILE -- THIS IS NEEDED TO COMPLETE EVALUATION OF RESISTIVITY AND OHMIC HEATING *DDEFIN: SET UP PHYSICS DATA FOR ANALYSIS: TIME RANGE IS TINIT= 3.8000E+01, FTIME= 2.5000E+02 SECONDS. SETSCD - SET SCALAR DATA FOR UPF SETTIM - SET UP TIMING INFORMATION FOR UPF *UF1GET: PROCESSING "CUR": plasma current amps ------------------- %CHKTIM: DATA TIME RANGE 0.0000E+00 TO 1.0000E+02 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). *UF1GET: PROCESSING "RBZ": [ext. B field] * R Tesla*cm ----------- %FIXUNS: CONVERTING UFILE RBZ DATA UNITS, M.T , TO Tesla*cm >CONVERSION FACTOR: * 100.000 %CHKTIM: DATA TIME RANGE 0.0000E+00 TO 1.0000E+02 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %SETDFLT: "GAS" INPUT DATA FILE NOT SPECIFIED ==>DEFAULT VALUE SUBSTITUTED, GASFLN = 0.0000E+00 %SETDFLT: "VSF" INPUT DATA FILE NOT SPECIFIED ==>DEFAULT VALUE SUBSTITUTED, VSURI = 1.0000E+00 *UF3GET: PROCESSING "MMX": Equilibrium moments cm ---------------- %FIXUNS: CONVERTING UFILE DATA UNITS, M , TO cm >CONVERSION FACTOR: * 100.000 %CHKTIM: DATA TIME RANGE 0.0000E+00 TO 5.5000E+01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %Geteq: MMX file does not cover time range of run; equilibrium geometry will be extrapolated flat to fill the time range ---> Geteq: #moments NMOM = 16 Geteq: Interpolate equilibrium data for UPF SETLIM - SET UP Axisymmetric limiter data for UPF *UF1GET: PROCESSING "LIM": Axisymmetric Limiter cm --------------- %UF1GET: X axis is not the timebase, processing axis units cm %FIXUNS: CONVERTING UFILE LIM TIMEBASE UNITS, M , TO cm >CONVERSION FACTOR: * 100.000 %FIXUNS: CONVERTING UFILE LIM DATA UNITS, M , TO cm >CONVERSION FACTOR: * 100.000 *UF2GET: PROCESSING "QPR": q profile --------------------------- %UF2GET -- INPUT UFILE AXES OUT OF ORDER, WILL SWAP: 1ST DIMENSION = " "; 2ND DIMENSION = "seconds " %CHKTIM: DATA TIME RANGE 0.0000E+00 TO 5.5000E+01 SECONDS DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME). %SETDAT2-- X axis is normalized flux, not modified, npts= 41 *DDEFIN: Set Plasma Heating parameters :- ========================== -> entering setecp (ECH/ECCD powers) ...setting ECH/ECCD powers from namelist. ECH/ECCD powers not stored in trdat. Zeff fixed in time and space: Zeff data only found in namelist. %SETDFLT: "DTG" INPUT DATA FILE NOT SPECIFIED ==>DEFAULT VALUE SUBSTITUTED, DTMAXG = 1.0000E+00 %setmisc -- time dependent geometry timestep enabled (ZOOM is off). %SETDFLT: "DTS" INPUT DATA FILE NOT SPECIFIED ==>DEFAULT VALUE SUBSTITUTED, DT_SOURCES = 2.0000E+00 %setmisc -- time dependent source timestep enabled (ZOOM is off). %SETDFLT: "DTX" INPUT DATA FILE NOT SPECIFIED ==>DEFAULT VALUE SUBSTITUTED, DT_OUTPUT = 5.0000E-01 %setmisc -- time dependent output timestep enabled (ZOOM is off). -------------------------------------------------- %trdat_bdy_check -- checking plasma boundary data trdat_bdy_check: OK ...min(r_curvature/(Rmax-Rmin)) is: 9.487358686829601E-002 ...at time t= 50.0000000000000 seconds. ------------> thermal ion ptcl balance summary: Hydrogen (absent) Deuterium NDEFINE=0 NMODEL=1 RC=Tau(p) GF=ZERO Tritium NDEFINE=0 NMODEL=1 RC=Tau(p) GF=ZERO Helium-3 (absent) Helium-4 (absent) Lithium-6 (absent) Recycling fractions RFRAC are specified. ------------------------------------ Fast ion summary: Beam species: (None) Fusion product species: T, He3, He4 Minority RF species: (None) ------------------------------------ In TRDAT: calling copy_hcd_nml copy_gennml_sub: template fetch via "mds_get_inf" subprocess... COPY_GENNML_SUB: $UFILES_ROOT/bin/mds_get_inf s TRANSPGRID.PPPL.GOV t TRANSP_ST 40 r 00425E15 l .NML:GENRAY_ECH q ************************************************************************ Program: mds_get_inf Version: v0.3.2 Revision: 953b182 Date: 03/20/2024 ************************************************************************ mds_get_inf retrievs a text node from a TRANSP run and writes it into a file . or uses TRANSP conventions: name_list -> TR.DAT contents -> TF.PLN mds_shot = 4250515 mds_conopn: option = 3 4250515 TRANSP_ST40 ...connecting to server: TRANSPGRID.PPPL.GOV mds_shot = 4250515 .NML:GENRAY_ECH does not exist 1 COPY_GENNML_SUB: failed to extract .NML:GENRAY_ECH (now look for template file). COPY_GENNML_SUB: namelist: GENRAY_ECH_TEMPLATE= " /p/sol-codes/TRANSP/LSN_rampup/genray.in" COPY_GENNML_SUB: Genray template file= /p/sol-codes/TRANSP/LSN_rampup/genray.in COPY_GENNML_SUB: zcmd= cp /p/sol-codes/TRANSP/LSN_rampup/genray.in ./00425E15_genray_ech.in COPY_GENNML_SUB: file copy status (0 is normal): 0 In TRDAT: calling COPY_PTNML COPY_PTNML_SUB: namelist: pt_template= " /p/sol-codes/TRANSP/LSN_rampup/pt_mmm_2.nml" COPY_PTNML_SUB: PT_SOLVER namelist file= /p/sol-codes/TRANSP/LSN_rampup/pt_mmm_2.nml COPY_PTNML_SUB: zcmd= cp /p/sol-codes/TRANSP/LSN_rampup/pt_mmm_2.nml ./00425E15_pt.nml COPY_PTNML_SUB: file copy status (0 is normal): 0 In TRDAT: calling COPY_MMMNML COPY_MMM_SUB: namelist: mmm_template= " /p/sol-codes/TRANSP/LSN_rampup/jeff_mmm.nml" COPY_MMM_SUB: MMM namelist file= /p/sol-codes/TRANSP/LSN_rampup/jeff_mmm.nml COPY_MMM_SUB: zcmd= cp /p/sol-codes/TRANSP/LSN_rampup/jeff_mmm.nml ./00425E15_mmm.nml COPY_MMM_SUB: file copy status (0 is normal): 0 In TRDAT: calling COPY_GLF23NML COPY_GLF23_SUB: namelist: glf23_template= "" COPY_GLF23_SUB: GLF23_TEMPLATE is blank; Default used COPY_GLF23_SUB: GLF23 namelist file= $LOCAL/tables/transport_nml/glf23_inp.nml COPY_GLF23_SUB: zcmd= cp $LOCAL/tables/transport_nml/glf23_inp.nml ./00425E15_glf23.nml COPY_GLF23_SUB: file copy status (0 is normal): 0 ==========(runtrx TRDAT sts = 0)====== ==>runtrx: trdat execution successful will write to mdsplus later ==========LABEL execution=============== date: Mon Apr 14 10:01:31 EDT 2025 ( mccune001.pppl.gov ) ==>runtrx: label execution successful ==========add TF.PLN to MDSplus ======== ==========(runtrx)====================== date: Mon Apr 14 10:01:31 EDT 2025 ( mccune001.pppl.gov ) ************************************************************************ Program: mds_start Version: v0.3.2 Revision: 953b182 Date: 03/20/2024 ************************************************************************ mds_conopn: option = 4 4250515 TRANSP_ST40 ...connecting to server: TRANSPGRID.PPPL.GOV ...tcl("EDIT TRANSP_ST40/SHOT=4250515") nid = 77 open 00425E15TF.PLN add_file: 6560 lines - 63 tcl("WRITE") stat = 1 ==========add PH.CDF to MDSplus ======== ==========(runtrx)====================== date: Mon Apr 14 10:01:32 EDT 2025 ( mccune001.pppl.gov ) ==>runtrx: LINK_ON_HOST environment variable detected. ==========(runtrx)====================== ==========>runtrx normal exit<========== date: Mon Apr 14 10:01:32 EDT 2025 ( mccune001.pppl.gov )